ABOUT THIS RECORDspecies: Bombus terrestris
miRNA family: miR-2706
source: miRNEST
Taxonomy by NCBI:
Bombus terrestris Bombus Bombus Bombini Bombinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAAGATAAGACCTTACTGCAT miRNA* GTAAAAAAGTTCTTATTATTTC mismatches: 4 bulges: 1 |
pre-miRNA
GAAGGTATATATGTAAAAAAGTTCTTATTATTTCTATATAACTTATAGTTTTAGATAGTTCTAAATTAAGGTAGGATTAAACGCGAAGATAAGACCTTAC
TGCATAAATCTTAT
dot-bracket secondary structure
.(((((...((((((...(((.(((((((.((((((...((((...)))).))))((((((((........)))))))).....)).))))))).)))..
)))))).)))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GAAGGTATATATGTAAAAAAGTTCTTATTATTTCTATATAACTTATAGTTTTAGATAGTTCTAAATTAAGGTAGGATTAAACGCGAAGATAAGACCTTAC
TGCATAAATCTTAT
dot-bracket secondary structure
.(((((...((((((...(((.(((((((.((((((...((((...)))).))))((((((((........)))))))).....)).))))))).)))..
)))))).)))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
