ABOUT THIS RECORDspecies: Rana catesbeiana
miRNA family: mir-651
source: miRNEST
Taxonomy by NCBI:
Rana catesbeiana Aquarana Aquarana/sylvatica group Novirana Rana Raninae Ranidae Ranoidea Neobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTAGATTATGCTTGACTTTG miRNA* ATTACTCAAGCATGGTCTACAGC mismatches: 3 bulges: 2 |
pre-miRNA
TGGTTAGTAGAAAGAGGTTTCTTTAGATTATGCTTGACTTTGAACTTATCAAGAACAGTGATGAAAAACCTGCAGGTGTTGTACTTCCCACACACCCAAT
ATGAGAAGAAGGGGTAGGGGAACCTGTATAGACTTTTCAAATAAGCGCCAATTCCATAATACAATTACTCAAGCATGGTCTACAGCAAAGCCGTTAGGTG
ACTA
dot-bracket secondary structure
.(((((....((...(((((((.((((((((((((((..(((...((((...(((..(((.((((((..((((((((........((((....((((...
...........))))..))))))))))..))..))))))......)))...))).))))..)))....)))))))))))))).))..))))).))...))
))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TGGTTAGTAGAAAGAGGTTTCTTTAGATTATGCTTGACTTTGAACTTATCAAGAACAGTGATGAAAAACCTGCAGGTGTTGTACTTCCCACACACCCAAT
ATGAGAAGAAGGGGTAGGGGAACCTGTATAGACTTTTCAAATAAGCGCCAATTCCATAATACAATTACTCAAGCATGGTCTACAGCAAAGCCGTTAGGTG
ACTA
dot-bracket secondary structure
.(((((....((...(((((((.((((((((((((((..(((...((((...(((..(((.((((((..((((((((........((((....((((...
...........))))..))))))))))..))..))))))......)))...))).))))..)))....)))))))))))))).))..))))).))...))
))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
