miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Xenopus laevis, Gallus gallus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Anolis carolinensis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Taeniopygia guttata, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Rana catesbeiana, Cynops pyrrhogaster, Ambystoma tigrinum tigrinum, Cavia porcellus, Bos indicus, Meleagris gallopavo, Lonchura striata domestica, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta

ABOUT THIS RECORD

ID: MNEST009462
species: Rana catesbeiana
miRNA family: miR-2444
source: miRNEST

Taxonomy by NCBI:
Rana catesbeiana Aquarana Aquarana/sylvatica group Novirana Rana Raninae Ranidae Ranoidea Neobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTTTTTTTGTTTTTTGTTTTT

miRNA*
AAACCGAAAACGAAATTGATG

mismatches: 3
bulges: 0

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pre-miRNA
TTCAGTACTGAAACTGAAACTTCAGTATGCAAAAACCGAAAACGAAATTGATGTTTTTTTTTTTGTTTTTTGTTTTTTTAAAAGATATATTTTTTATAAA
TAATTA

dot-bracket secondary structure
....((((((((........))))))))..((((((.((((((((((..((.....))..)))))))))).)))))).(((((((....)))))))....
......

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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