ABOUT THIS RECORDspecies: Myzus persicae
miRNA family: miR-4193
source: miRNEST
Taxonomy by NCBI:
Myzus persicae Myzus Macrosiphini Aphidinae Aphididae Aphidoidea Aphidomorpha Aphidiformes Sternorrhyncha Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGTTTAACAAGTGTATTTTT miRNA* AAGTACATGTTGTTGAATTTAT mismatches: 4 bulges: 1 |
pre-miRNA
TCATCTTGCAGCTGACATGAATGGTCCTGACGAGTGGAACAAGTACATGTTGTTGAATTTATATTCAGTAACTTGTTTAACAAGTGTATTTTTATCTAAG
TTCAATTCAGATACAGCTGAAAGATGCATT
dot-bracket secondary structure
.((((((.((((((...(((((......(((...((((..((((((((.(((((((((((((.....))))...)))))))))))))))))...)))).)
))..)))))....)))))).))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCATCTTGCAGCTGACATGAATGGTCCTGACGAGTGGAACAAGTACATGTTGTTGAATTTATATTCAGTAACTTGTTTAACAAGTGTATTTTTATCTAAG
TTCAATTCAGATACAGCTGAAAGATGCATT
dot-bracket secondary structure
.((((((.((((((...(((((......(((...((((..((((((((.(((((((((((((.....))))...)))))))))))))))))...)))).)
))..)))))....)))))).))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
