miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Drosophila simulans, Glossina morsitans morsitans, Phlebotomus papatasi, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Teleopsis dalmanni, Lutzomyia longipalpis, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Ceratitis capitata, Drosophila mojavensis, Cochliomyia hominivorax, Anopheles stephensi, Haematobia irritans irritans, Polypedilum vanderplanki, Drosophila yakuba

ABOUT THIS RECORD

ID: MNEST009485
species: Drosophila willistoni
miRNA family: mir-210
source: miRNEST

Taxonomy by NCBI:
Drosophila willistoni willistoni subgroup willistoni group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
CTGTGCAGTTGCCAGCAGCTG

miRNA*
GTTGTCGGCATTGCCGCAGAA

mismatches: 1
bulges: 2

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pre-miRNA
TGCCCGATGAGCTGTGCAGTTGCCAGCAGCTGAGTGTACTGAGTGTGGCAAATAATCAGTTGTCGGCATTGCCGCAGAATATTGGAA

dot-bracket secondary structure
...((((((..(((((((((.(((.((((((((.(((..........))).....)))))))).))))))).)))))..))))))..

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt sp|Q9V780|LAP1_DROME: 0.000000006

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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