ABOUT THIS RECORDspecies: Cynops pyrrhogaster
miRNA family: miR-2182
source: miRNEST
Taxonomy by NCBI:
Cynops pyrrhogaster Cynops Salamandridae Salamandroidea Caudata Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACGCCACATTTCCCGCGCCCG miRNA* GGCGGGGGATTCGGCGCTG mismatches: 4 bulges: 2 |
pre-miRNA
CGGTCTTCTGTACGCCACATTTCCCGCGCCCGCCGCCGGGCGGGGGATTCGGCGCTGGGCTCTTC
dot-bracket secondary structure
.(((((......((((....(((((.((((((....)))))))))))...))))..)))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGGTCTTCTGTACGCCACATTTCCCGCGCCCGCCGCCGGGCGGGGGATTCGGCGCTGGGCTCTTC
dot-bracket secondary structure
.(((((......((((....(((((.((((((....)))))))))))...))))..)))))....
SIMILARITIES| miRBase mmu-mir-2182: 0.0000000007 PMRD no hits microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 0.00005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
