ABOUT THIS RECORDspecies: Misgurnus anguillicaudatus
miRNA family: miR-4117
source: miRNEST
Taxonomy by NCBI:
Misgurnus anguillicaudatus Misgurnus Cobitinae Cobitidae Cobitoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTGAAGGTAATGGATTTG miRNA* AAGCCTTTGCCAAATGCATAGT mismatches: 5 bulges: 1 |
pre-miRNA
GATATAGTGTAGCATTATAGCTGTGTGAAGGTAATGGATTTGATTCCACACACTAAGTGATAAATTGTATACATGCACTGTAGGTCACTTTGGATAAAAG
CCTTTGCCAAATGCATAGTTGTAAGTTTATCTGAGCT
dot-bracket secondary structure
....(((...(((.(((((((((((((..(((((.((.(((...((((......(((((((........((((.....)))).)))))))))))..))).
)).)))))...))))))))))))))))...)))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATATAGTGTAGCATTATAGCTGTGTGAAGGTAATGGATTTGATTCCACACACTAAGTGATAAATTGTATACATGCACTGTAGGTCACTTTGGATAAAAG
CCTTTGCCAAATGCATAGTTGTAAGTTTATCTGAGCT
dot-bracket secondary structure
....(((...(((.(((((((((((((..(((((.((.(((...((((......(((((((........((((.....)))).)))))))))))..))).
)).)))))...))))))))))))))))...)))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM UnaL2: 0.00000003 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
