ABOUT THIS RECORDspecies: Spodoptera littoralis
miRNA family: miR-2325b
source: miRNEST
Taxonomy by NCBI:
Spodoptera littoralis Spodoptera Amphipyrinae Noctuidae Noctuoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGATTGTTTGGTTTTGTGATT miRNA* TCACAGAATCATTGGTCTTC mismatches: 2 bulges: 1 |
pre-miRNA
ACACTTCCACCCTGCAATGTTATCACAGAATCATTGGTCTTCTCATTATATACAAGCTATATAATTGTTATAGCTAGGTAAACTAGCTGATGTTATTCTA
AATTTACATTTATATATTTATACATTATGAAGCTGAAGAGATTGTTTGGTTTTGTGATTGAACGCGCTGATCTCCGGT
dot-bracket secondary structure
.................((((((((((((((((.(((((((.((((((((....((.(((((((.(((..(((((((.....)))))))...........
.....))).))))))).))......)))))...))).)))))))..))))))))))))..)))).((((.....))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ACACTTCCACCCTGCAATGTTATCACAGAATCATTGGTCTTCTCATTATATACAAGCTATATAATTGTTATAGCTAGGTAAACTAGCTGATGTTATTCTA
AATTTACATTTATATATTTATACATTATGAAGCTGAAGAGATTGTTTGGTTTTGTGATTGAACGCGCTGATCTCCGGT
dot-bracket secondary structure
.................((((((((((((((((.(((((((.((((((((....((.(((((((.(((..(((((((.....)))))))...........
.....))).))))))).))......)))))...))).)))))))..))))))))))))..)))).((((.....))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
