ABOUT THIS RECORDspecies: Danaus plexippus
miRNA family: miR-1648
source: miRNEST
Taxonomy by NCBI:
Danaus plexippus Danaus Danaus Danaina Danaini Danainae Nymphalidae Papilionoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCTCGGCTCGGCTCGGCTC miRNA* GCTCTCGGGCCTCGCCACG mismatches: 4 bulges: 2 |
pre-miRNA
CCGACCCTGCCTGGCTCGGCTCGGCTCGGCTCGATTCGGCTCTCGGGCCTCGCCACGGCTCGCTA
dot-bracket secondary structure
........(((((((..(((((((...((((......)))).)))))))..)))).)))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCGACCCTGCCTGGCTCGGCTCGGCTCGGCTCGATTCGGCTCTCGGGCCTCGCCACGGCTCGCTA
dot-bracket secondary structure
........(((((((..(((((((...((((......)))).)))))))..)))).)))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
