miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Ictalurus punctatus, Pimephales promelas, Ictalurus furcatus, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus



ABOUT THIS RECORD

ID: MNEST009654
species: Rutilus rutilus
miRNA family: miR-124
source: miRNEST

Taxonomy by NCBI:
Rutilus rutilus Rutilus Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGTGTTCACAGCGGACCTTGA

miRNA*
 AAGGCACGCGGTGAATGCCAA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 GAAAACAGGCCTGCTTTTCTTCGTGTTCACAGCGGACCTTGATTTAAATGTCCATACAATTAAGGCACGCGGTGAATGCCAAGAGAGATGGCAAATATCA


dot-bracket secondary structure
........(((...(((((((.((((((((.(((..((((((((.............))))))))..))).)))))))).)))))))..)))........



SIMILARITIES
miRBase dre-mir-124-2: 7e-42

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-124: 5e-40		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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