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Species belonging to selected taxon:
Danio rerio
,
Ictalurus punctatus
,
Pimephales promelas
,
Ictalurus furcatus
,
Cyprinus carpio
,
Misgurnus anguillicaudatus
,
Rutilus rutilus
ABOUT THIS RECORD
ID:
MNEST009655
species:
Rutilus rutilus
miRNA family:
miR-466h
source:
miRNEST
Taxonomy by NCBI:
Rutilus rutilus
Rutilus
Cyprinidae
Cyprinoidea
Cypriniformes
Cypriniphysi
Otophysi
Ostariophysi
Otocephala
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CACGCACACACACACACACCA
miRNA*
GTGTGTCTGTGTGAGCG
mismatches:
4
bulges:
0
View larger
pre-miRNA
ACACGCACACA
CACGCACACACACACACACCA
GACTATTGCTATGAAACACTTTTTTCCCCTTGCCAGTTACAGACAAGCCTTTTCCCCATGGATGTGGC
TAGATTGCATGTTG
GTGTGTCTGTGTGAGCG
dot-bracket secondary structure
...........
..(((.((((((.((((((((
((((...((...((((......)))).....)).))))(((..((((((...(((....)))...)))
)....))..)))))
)))))).)))))).)))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record