ABOUT THIS RECORDspecies: Rutilus rutilus
miRNA family: miR-466h
source: miRNEST
Taxonomy by NCBI:
Rutilus rutilus Rutilus Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CACGCACACACACACACACCA miRNA* GTGTGTCTGTGTGAGCG mismatches: 4 bulges: 0 |
pre-miRNA
ACACGCACACACACGCACACACACACACACCAGACTATTGCTATGAAACACTTTTTTCCCCTTGCCAGTTACAGACAAGCCTTTTCCCCATGGATGTGGC
TAGATTGCATGTTGGTGTGTCTGTGTGAGCG
dot-bracket secondary structure
.............(((.((((((.((((((((((((...((...((((......)))).....)).))))(((..((((((...(((....)))...)))
)....))..))))))))))).)))))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
ACACGCACACACACGCACACACACACACACCAGACTATTGCTATGAAACACTTTTTTCCCCTTGCCAGTTACAGACAAGCCTTTTCCCCATGGATGTGGC
TAGATTGCATGTTGGTGTGTCTGTGTGAGCG
dot-bracket secondary structure
.............(((.((((((.((((((((((((...((...((((......)))).....)).))))(((..((((((...(((....)))...)))
)....))..))))))))))).)))))).)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
