miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Drosophila simulans, Glossina morsitans morsitans, Phlebotomus papatasi, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Teleopsis dalmanni, Lutzomyia longipalpis, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Ceratitis capitata, Drosophila mojavensis, Cochliomyia hominivorax, Anopheles stephensi, Haematobia irritans irritans, Polypedilum vanderplanki, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST009659
species: Anopheles stephensi
miRNA family: miR-466f
source: miRNEST

Taxonomy by NCBI:
Anopheles stephensi stephensi species complex Neocellia Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATACAGACACACATACACAC

miRNA*
 GTGTGTGTGGTTCAGTAATG

mismatches: 3
bulges: 1
View larger
pre-miRNA
 CGTACAAACAGCATACCCAAGTATACAGACACACATACACACACACTTACAGATTCGAGTACAGAGAGAGCCGAAAATTAAACACAGCCAGATTCAAAAT
CTAATTTAGTAGCTAAGCTGACGTTAAAAGCGGAACGGAAGGATATGCAACAACGGTGTGTGTGTGGTTCAGTAATGTGGGGCTGGCTGTCCACT

dot-bracket secondary structure
.......(((((...((((.((.(((.((..(((((((((((..((((........))))..(((.(((...(((.................)))....)
))..))).((.((....((..((((........))))...))....)).))....)))))))))))..)).))))).))))....))))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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