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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000966
species: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCCGTAAACTAATATAAGAA

miRNA*
 TTTATATTAGTTTATATAGTG

mismatches: 3
bulges: 0
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pre-miRNA
 GCAGCCTGAAACCTGTTACTCCCTCCGTAAACTAATATAAGAACGTTTGGATCACTATTTTAATGATCTAAATGCTTTTATATTAGTTTATATAGTGAGTA
CATGTAACTATCCG

dot-bracket secondary structure
).........((.(((.((((.((..((((((((((((((((.(((((((((((.((...)).))))))))))).))))))))))))))))..)).)))))
)).)).........


SIMILARITIES
miRBase tae-MIR1121: 6.0E-9

PMRD tmo-miR1120: 6.0E-15

microPC miR1121: 0.0003		UniProt no hits

RFAM 2MIR1122: 2.0E-24		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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