ABOUT THIS RECORDspecies: Anopheles stephensi
miRNA family: miR-466h
source: miRNEST
Taxonomy by NCBI:
Anopheles stephensi stephensi species complex Neocellia Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCACACGCACACACACACAC miRNA* GTGTGTGTGTGAATGTGCACA mismatches: 2 bulges: 0 |
pre-miRNA
TTTTTAATGCACACGCACACACACACACACTCATATACCTACCCCGGAGTACACAGCAACCACCTTTTGATCCATATCGAGTAATTCGTAGTAAGAAACG
AAAAAGCGAAACCAAACAGCAAAATCCTAATAGTGCGCACATTGGACTGATATGTGTGTGTGTGTGTGAATGTGCACAAACA
dot-bracket secondary structure
.......((((((..(((((((((((((((..((((.......((((.((.....(((......(((((.......(((.....(((((........)))
))....)))..........))))).........)))..)).))))....)))))))))))))))))))..))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
TTTTTAATGCACACGCACACACACACACACTCATATACCTACCCCGGAGTACACAGCAACCACCTTTTGATCCATATCGAGTAATTCGTAGTAAGAAACG
AAAAAGCGAAACCAAACAGCAAAATCCTAATAGTGCGCACATTGGACTGATATGTGTGTGTGTGTGTGAATGTGCACAAACA
dot-bracket secondary structure
.......((((((..(((((((((((((((..((((.......((((.((.....(((......(((((.......(((.....(((((........)))
))....)))..........))))).........)))..)).))))....)))))))))))))))))))..))))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
