ABOUT THIS RECORDspecies: Diabrotica virgifera virgifera
miRNA family: miR-2293
source: miRNEST
Taxonomy by NCBI:
Diabrotica virgifera virgifera Diabrotica virgifera Diabrotica Diabroticites Diabroticina Luperini Galerucinae Chrysomelidae Chrysomeloidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAATTTTGTTTTTTTGTATTA miRNA* ATACATTGAAATGTTATTACG mismatches: 4 bulges: 0 |
pre-miRNA
AAGCCATATTTAATACATTGAAATGTTATTACGATATGGATAAAAGAGCATTCTTTTTACCGTAGAAAAATTATTGGATGTAAGAAAATATGTAATTTTG
TTTTTTTGTATTAAGTTTTTTA
dot-bracket secondary structure
.......((((((((((..((((((..((((((.(((((..((((((....))))))..))))).....(((.((........)).))).))))))..))
))))..))))))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AAGCCATATTTAATACATTGAAATGTTATTACGATATGGATAAAAGAGCATTCTTTTTACCGTAGAAAAATTATTGGATGTAAGAAAATATGTAATTTTG
TTTTTTTGTATTAAGTTTTTTA
dot-bracket secondary structure
.......((((((((((..((((((..((((((.(((((..((((((....))))))..))))).....(((.((........)).))).))))))..))
))))..))))))))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
