miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Lumbricus rubellus, Tubifex tubifex



ABOUT THIS RECORD

ID: MNEST009672
species: Tubifex tubifex
miRNA family: miR-1396
source: miRNEST

Taxonomy by NCBI:
Tubifex tubifex Tubifex Tubificidae Tubificina Haplotaxida Oligochaeta Clitellata Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTGTTGATTGTCTGCTGTGC

miRNA*
 GATGCATGACGTACGTTGGGTT

mismatches: 5
bulges: 1
View larger
pre-miRNA
 ATTGTTTGGTGCGATGCATGACGTACGTTGGGTTTTTTGTGGGTTTGTTTTCCTCGGGCTTCTGTTGATTGTCTGCTGTGCTTGTCTGTC

dot-bracket secondary structure
.......((.(((..(((.((((..((.((((...((((.(((.......))).))))..)))).))..)))))))..)))....))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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