ABOUT THIS RECORDspecies: Haematobia irritans irritans
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Haematobia irritans irritans Haematobia irritans Haematobia Stomoxyini Muscinae Muscidae Muscoidea Calyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GATGATGCTGATGATGGTGAT miRNA* TGCTATCACAGTCAATTTG mismatches: 3 bulges: 2 |
pre-miRNA
CGGCCGCATCGATGCTATCACAGTCAATTTGCTCCTCAGTTTGTGGCAGTTGATGATGCTGATGATGGTGATGATGCTGTA
dot-bracket secondary structure
..((.((((((.((((((((((((..(((.(((((.((...)).)).))).)))...)))).)))))))).)))))).)).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGGCCGCATCGATGCTATCACAGTCAATTTGCTCCTCAGTTTGTGGCAGTTGATGATGCTGATGATGGTGATGATGCTGTA
dot-bracket secondary structure
..((.((((((.((((((((((((..(((.(((((.((...)).)).))).)))...)))).)))))))).)))))).)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.000004 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
