miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Drosophila simulans, Glossina morsitans morsitans, Phlebotomus papatasi, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Teleopsis dalmanni, Lutzomyia longipalpis, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Ceratitis capitata, Drosophila mojavensis, Cochliomyia hominivorax, Anopheles stephensi, Haematobia irritans irritans, Polypedilum vanderplanki, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST009686
species: Haematobia irritans irritans
miRNA family: miR-4218
source: miRNEST

Taxonomy by NCBI:
Haematobia irritans irritans Haematobia irritans Haematobia Stomoxyini Muscinae Muscidae Muscoidea Calyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGATTTTATAAAAAGTAGTA

miRNA*
 CTACATTTTATAATTTCCAAA

mismatches: 5
bulges: 0
View larger
pre-miRNA
 TTTGACACTAATACTACATTTTATAATTTCCAAACATGTTTAGGTATTTTTTCTTTAATTAACAACAACATAATAAGATTTTATAAAAAGTAGTATATGT
CAATG

dot-bracket secondary structure
.((((((...(((((((.((((((((..((.....(((((...((................))...))))).....))..)))))))).))))))).)))
)))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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