ABOUT THIS RECORDspecies: Eriocheir sinensis
miRNA family: miR-1412
source: miRNEST
Taxonomy by NCBI:
Eriocheir sinensis Eriocheir Varunidae Grapsoidea Thoracotremata Heterotremata/Thoracotremata group Eubrachyura Brachyura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGTGAGGAAGGCGAGGATA miRNA* TCCTCCTCTTCCTCCTCTTC mismatches: 4 bulges: 1 |
pre-miRNA
TGAGGTCTCCGTGAGTGAGGAAGGCGAGGATATGGAGGCTGATCCGTGTTGTGGCTGTCGACCTCCGTGTGGTTGTGACTCCCTGACAACCTAACCGCTC
AAATCACTCCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCTCCT
dot-bracket secondary structure
.((((.......(((.((((((((.(((((...(((((.((((...((..((((.((.............((((((.........)))))))).)))).)
).))))..)))))...))))).))))))))))).....))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGAGGTCTCCGTGAGTGAGGAAGGCGAGGATATGGAGGCTGATCCGTGTTGTGGCTGTCGACCTCCGTGTGGTTGTGACTCCCTGACAACCTAACCGCTC
AAATCACTCCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCTCCT
dot-bracket secondary structure
.((((.......(((.((((((((.(((((...(((((.((((...((..((((.((.............((((((.........)))))))).)))).)
).))))..)))))...))))).))))))))))).....))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
