miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Eriocheir sinensis, Carcinus maenas, Callinectes sapidus



ABOUT THIS RECORD

ID: MNEST009691
species: Eriocheir sinensis
miRNA family: mir-467
source: miRNEST

Taxonomy by NCBI:
Eriocheir sinensis Eriocheir Varunidae Grapsoidea Thoracotremata Heterotremata/Thoracotremata group Eubrachyura Brachyura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTGCATGTGCATGTGTGT

miRNA*
 AACTATGCCAGCAAACGTC

mismatches: 4
bulges: 2
View larger
pre-miRNA
 ATTCGTGTGTGTGTGCATGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAATTACCCT
TAGCTCATAAAGTGGATAATGTGATAATACTTAACCAAAACATTCCACCTCTTCGTACACACAATACAGAGAAAACACGAACCCAACTATGCCAGCAAAC
GTCTCAGGT

dot-bracket secondary structure
.........(((.(((.((.(((((..((.((.(((((.....(((((.((((((((((.(((((...((((...((.((..((((.(((((((((.((.
..(((.....))))).)))).)))))))))...))))..))))..)))))...)))))))))))))))......))))).)).))..)))))))))).))
)........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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