ABOUT THIS RECORDspecies: Lonchura striata domestica
miRNA family: miR-4110
source: miRNEST
Taxonomy by NCBI:
Lonchura striata domestica Lonchura striata Lonchura Estrildinae Estrildidae Passeroidea Passeriformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CACATGTTGTTTACATGTGTT miRNA* CACACACGTGAATCACATGTGAA mismatches: 2 bulges: 2 |
pre-miRNA
TCATATGACCTCAATATTGATCACATGTTGTTTACATGTGTTTGGTAAACACAATCACACACGTGAATCACATGTGAATAAATGAGATTGGATCCT
dot-bracket secondary structure
......((.((((...(((.((((((((.((((((.((((((((.......)))..))))).)))))).)))))))).))).)))).)).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCATATGACCTCAATATTGATCACATGTTGTTTACATGTGTTTGGTAAACACAATCACACACGTGAATCACATGTGAATAAATGAGATTGGATCCT
dot-bracket secondary structure
......((.((((...(((.((((((((.((((((.((((((((.......)))..))))).)))))).)))))))).))).)))).)).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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