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Species belonging to selected taxon:

Oryzias latipes, Gasterosteus aculeatus, Fundulus heteroclitus, Poecilia reticulata



ABOUT THIS RECORD

ID: MNEST009711
species: Poecilia reticulata
miRNA family: mir-133
source: miRNEST

Taxonomy by NCBI:
Poecilia reticulata Poecilia Poeciliinae Poeciliidae Cyprinodontoidei Cyprinodontiformes Atherinomorpha Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGTCACCTTCTACCAGCTGT

miRNA*
AGCTTGGTGGTTCCTGTACTGTG

mismatches: 4
bulges: 2

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pre-miRNA
AGTGGCTGCAGCAGCTTGGTGGTTCCTGTACTGTGATGAAAGCCCAATGGTCACCTTCTACCAGCTGTCGCACTTTA

dot-bracket secondary structure
...((.(((.((((((.(((((....((.(((((............)))))))....))))))))))).)))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q92105|AT2A1_RANES: 0.00001

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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