ABOUT THIS RECORDspecies: Mnemiopsis leidyi
miRNA family: miR-145
source: miRNEST
Taxonomy by NCBI:
Mnemiopsis leidyi Mnemiopsis Bolinopsidae Lobata Cyclocoela Ctenophora Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTCCCGGAAATACTGTTCTC miRNA* GAACTGTATTTTAGGAAAGA mismatches: 3 bulges: 1 |
pre-miRNA
GCTTTGAATAGAGAACTGTATTTTAGGAAAGATTGAGAAATGACTTCAAAATGTGGCAGTGTTTGGTCGCCTAACTTTTCTATTCTTGAACCGCTATCAC
ATGCTGCCATATAACTGTGGCCCTTCCCGGAAATACTGTTCTCTATAATTGC
dot-bracket secondary structure
.......(((((((((.(((((((.((((..(((....)))..((.((..((((((((((((.((((.((......................)).)))).
))))))))))))...)).))...))))..))))))).)))))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCTTTGAATAGAGAACTGTATTTTAGGAAAGATTGAGAAATGACTTCAAAATGTGGCAGTGTTTGGTCGCCTAACTTTTCTATTCTTGAACCGCTATCAC
ATGCTGCCATATAACTGTGGCCCTTCCCGGAAATACTGTTCTCTATAATTGC
dot-bracket secondary structure
.......(((((((((.(((((((.((((..(((....)))..((.((..((((((((((((.((((.((......................)).)))).
))))))))))))...)).))...))))..))))))).)))))))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
