miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Acyrthosiphon pisum, Aphis gossypii, Nilaparvata lugens, Myzus persicae, Peregrinus maidis, Rhodnius prolixus, Frankliniella occidentalis

ABOUT THIS RECORD

ID: MNEST009716
species: Rhodnius prolixus
miRNA family: mir-23
source: miRNEST

Taxonomy by NCBI:
Rhodnius prolixus Rhodnius Triatominae Reduviidae Reduvioidea Cimicomorpha Panheteroptera Neoheteroptera Euheteroptera Heteroptera Prosorrhyncha Neohemiptera Euhemiptera Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GGGTTCGTGGAATGCTGATTA

miRNA*
ATTAAATTGTAGGAACTCGA

mismatches: 3
bulges: 1

View larger

pre-miRNA
GGCCGGGGTTCGTGGAATGCTGATTATATTAATGTTTGTGATAATTAAATTGTAGGAACTCGACA

dot-bracket secondary structure
.....((((((.((.(((..(((((((..(((...)))..))))))).))).)).))))))....

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record