ABOUT THIS RECORDspecies: Rhodnius prolixus
miRNA family: mir-23
source: miRNEST
Taxonomy by NCBI:
Rhodnius prolixus Rhodnius Triatominae Reduviidae Reduvioidea Cimicomorpha Panheteroptera Neoheteroptera Euheteroptera Heteroptera Prosorrhyncha Neohemiptera Euhemiptera Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGTTCGTGGAATGCTGATTA miRNA* ATTAAATTGTAGGAACTCGA mismatches: 3 bulges: 1 |
pre-miRNA
GGCCGGGGTTCGTGGAATGCTGATTATATTAATGTTTGTGATAATTAAATTGTAGGAACTCGACA
dot-bracket secondary structure
.....((((((.((.(((..(((((((..(((...)))..))))))).))).)).))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGCCGGGGTTCGTGGAATGCTGATTATATTAATGTTTGTGATAATTAAATTGTAGGAACTCGACA
dot-bracket secondary structure
.....((((((.((.(((..(((((((..(((...)))..))))))).))).)).))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
