miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Carcinus maenas, Callinectes sapidus



ABOUT THIS RECORD

ID: MNEST009724
species: Carcinus maenas
miRNA family: mir-467
source: miRNEST

Taxonomy by NCBI:
Carcinus maenas Carcinus Portunidae Portunoidea Heterotremata Heterotremata/Thoracotremata group Eubrachyura Brachyura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGATACACACATACACACAC

miRNA*
 GTGTGTGTGTGTTTGTGTTTACC

mismatches: 0
bulges: 2
View larger
pre-miRNA
 TAATGAAGGAAAATTGATGTTACTGCTTGCTAGGGGTGATAAAAGGAGAGCTAAATAGGTGTGTGTGTGTGTGTTTGTGTTTACCTAGTTGTGGTTTACG
GGAGGGAGAGTCATGTAAACAACAATTAGGTAGATACACACATACACACACACTTGTACAACTCTCCCTCTATCACCCCTTGCAAGCGGTAACATCAATT
TTCCATGTGC

dot-bracket secondary structure
.......(((((((((((((((((((((((.((((((((((...((((((....((((((((((((((((((((..((((((((((((((((.(((((((
.((.......)).))))))).))))))))))))))))))))))))))))))))))))....))))))...)))))))))).)))))))))))))))))))
))))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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