miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Lepeophtheirus salmonis, Caligus rogercresseyi, Lernaeocera branchialis, Caligus clemensi, Calanus finmarchicus



ABOUT THIS RECORD

ID: MNEST009756
species: Lernaeocera branchialis
miRNA family: miR-493
source: miRNEST

Taxonomy by NCBI:
Lernaeocera branchialis Lernaeocera Pennellidae Siphonostomatoida Podoplea Neocopepoda Copepoda Maxillopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGACATGGTAGGCATTCAA

miRNA*
 TAATGCCGCTAATTCAATA

mismatches: 4
bulges: 2
View larger
pre-miRNA
 ATTTCGTTTTGTTGGACATGGTAGGCATTCAAATATGAAGAAGATTTAAATGCGCGAATTATCACTCCCGTAGGTCTTTTAATGCCGCTAATTCAATAAA
TTTTAA

dot-bracket secondary structure
.......(((((((((..((((.((((((.........((((((((....((((.((........)).)))))))))))))))))))))).)))))))))
......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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