miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum

ABOUT THIS RECORD

ID: MNEST000977
species: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
ACTACCTCCGTCCCATAATCT

miRNA*
GCGATGGATGGAGGTGATGA

mismatches: 3
bulges: 1

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pre-miRNA
TTCTAAATTTTACTACCTCCGTCCCATAATCTCGAGGGCGATGGATGGAGGTGATGAGCTCCAGC

dot-bracket secondary structure
........((((.(((((((((((.((..(((...)))..))))))))))))).)))).......

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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