ABOUT THIS RECORDspecies: Capra hircus
miRNA family: miR-4271
source: miRNEST
Taxonomy by NCBI:
Capra hircus Capra Caprinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGGGAAGTTAAGGTGGGGAT miRNA* TCCCACACAAGACTCCCTA mismatches: 4 bulges: 2 |
pre-miRNA
CCGTCTGACTTGGGGGAAGTTAAGGTGGGGATTTTGTTCCCACACAAGACTCCCTAGTTCTAGT
dot-bracket secondary structure
......((((.(((((...((...((((((((...))))))))...)).))))).)))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCGTCTGACTTGGGGGAAGTTAAGGTGGGGATTTTGTTCCCACACAAGACTCCCTAGTTCTAGT
dot-bracket secondary structure
......((((.(((((...((...((((((((...))))))))...)).))))).)))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
