ABOUT THIS RECORDspecies: Suberites domuncula
miRNA family: miR-3526
source: miRNEST
Taxonomy by NCBI:
Suberites domuncula Suberites Suberitidae Hadromerida Tetractinomorpha Demospongiae Porifera Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGAAGATGATTTTGGTGTCA miRNA* GCACCAGGTCCATCGCAAGA mismatches: 4 bulges: 1 |
pre-miRNA
GGCACCAGGTCCATCGCAAGAAAGAAAAACACTCACGAAGGAGGTCAAGATCTCGGTCACGTTCCCATAGCTCGGACTCTTCGTTTGAAGATGATTTTGG
TGTCAAGAAGGAGA
dot-bracket secondary structure
(((((((((..((((.(((...............((((((..((((..((.((.((........))..)).)).)))))))))))))..))))..)))))
))))..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGCACCAGGTCCATCGCAAGAAAGAAAAACACTCACGAAGGAGGTCAAGATCTCGGTCACGTTCCCATAGCTCGGACTCTTCGTTTGAAGATGATTTTGG
TGTCAAGAAGGAGA
dot-bracket secondary structure
(((((((((..((((.(((...............((((((..((((..((.((.((........))..)).)).)))))))))))))..))))..)))))
))))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
