ABOUT THIS RECORDspecies: Pan troglodytes verus
miRNA family: miR-1402
source: miRNEST
Taxonomy by NCBI:
Pan troglodytes verus Pan troglodytes Pan Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCGGAGAAGGTGGACCGGCTG miRNA* GCCAGTTCATCGAGTTTGCAA mismatches: 5 bulges: 0 |
pre-miRNA
CGCCCTTCTGCTGCCAGTTCATCGAGTTTGCAAACACAGTGGCGGAGAAGGTGGACCGGCTGCGCTCCTGG
dot-bracket secondary structure
........(((.(((.(((((((...(((((..((...)).)))))...))))))).))).))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CGCCCTTCTGCTGCCAGTTCATCGAGTTTGCAAACACAGTGGCGGAGAAGGTGGACCGGCTGCGCTCCTGG
dot-bracket secondary structure
........(((.(((.(((((((...(((((..((...)).)))))...))))))).))).))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9UGQ2|FLOWR_HUMAN: 0.0000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
