ABOUT THIS RECORDspecies: Pan troglodytes verus
miRNA family: miR-3655
source: miRNEST
Taxonomy by NCBI:
Pan troglodytes verus Pan troglodytes Pan Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTTGTCGCTGCGGTGTTGCT miRNA* AATGCCGGAGCGAGATAGT mismatches: 5 bulges: 1 |
pre-miRNA
GAGCTTGTCGCTGCGGTGTTGCTGTTGGAGACTCGATTGTTGGTGACAGCGGAAGAACGATAACAAAATGCCGGAGCGAGATAGT
dot-bracket secondary structure
..(((..(((((.(((((((..(((((.....((..((((((....))))))..))....))))).))))))).)))))...)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAGCTTGTCGCTGCGGTGTTGCTGTTGGAGACTCGATTGTTGGTGACAGCGGAAGAACGATAACAAAATGCCGGAGCGAGATAGT
dot-bracket secondary structure
..(((..(((((.(((((((..(((((.....((..((((((....))))))..))....))))).))))))).)))))...)))
SIMILARITIES| miRBase hsa-mir-3655: 2e-39 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
