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Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Gallus gallus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Anolis carolinensis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Taeniopygia guttata, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Meleagris gallopavo, Lonchura striata domestica, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST009819
species: Pan troglodytes verus
miRNA family: mir-22
source: miRNEST

Taxonomy by NCBI:
Pan troglodytes verus Pan troglodytes Pan Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGTTCTTCAGTGGCAAGCTTT

miRNA*
 AGCTGCCAGTTGAAGAACTGT

mismatches: 0
bulges: 2
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pre-miRNA
 CCAGCACCAGGAGCCTGTTCCTCTCACGCCCTCACCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGT
TGAAGAACTGTTGCCCTCTGCCCCTGGCTTCGAGGAGGAGGAGGAGCTGCTTTCCCCAT

dot-bracket secondary structure
.........(((((..((((((((.....((((.((.(((.(((..((((((((((((((((((((.((((((....(((...))).))))))))))).)
)))))))))))))).))).)))...))....))))....)))))))).)))))......


SIMILARITIES
miRBase mmu-mir-22: 9e-49

PMRD tae-miR1134: 0.0005

microPC no hits		UniProt no hits

RFAM mir-22: 1e-41		most similar mature miRNAs

Identical with: mne-mir-22 from miRBase (MNEST028181)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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