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Species belonging to selected taxon:
Aplysia californica
,
Lottia gigantea
,
Crassostrea gigas
,
Biomphalaria glabrata
,
Mytilus californianus
,
Euprymna scolopes
,
Lymnaea stagnalis
ABOUT THIS RECORD
ID:
MNEST009823
species:
Lymnaea stagnalis
miRNA family:
miR-3144
source:
miRNEST
Taxonomy by NCBI:
Lymnaea stagnalis
Lymnaea
Lymnaeidae
Lymnaeoidea
Basommatophora
Pulmonata
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATATCCCTGTTTGGTCTCTTA
miRNA*
GTGGACTTGGGCAGGAATGTAC
mismatches:
3
bulges:
1
View larger
pre-miRNA
TTAAGAATGCAAAGAGAAGGGA
GTGGACTTGGGCAGGAATGTAC
TTTAAAAGTGATATGAATGACCTCAATAAACATGGAAGG
ATATCCCTGTTTGGTCT
CTTA
CTCTTCTTATGCACTGAAA
dot-bracket secondary structure
.......((((..(((((((((
(.(((((.(((((((.((((.(
(((....(((...(((......))).....))).)))).
)))).))))))))))))
.)).
)))))))).))))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record