miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Aplysia californica
,
Lottia gigantea
,
Biomphalaria glabrata
,
Lymnaea stagnalis
ABOUT THIS RECORD
ID:
MNEST009826
species:
Lymnaea stagnalis
miRNA family:
miR-1603
source:
miRNEST
Taxonomy by NCBI:
Lymnaea stagnalis
Lymnaea
Lymnaeidae
Lymnaeoidea
Basommatophora
Pulmonata
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTGGTTTGGTTTGTTTTTTTT
miRNA*
AAAAACGAAACAAGCTATTCAA
mismatches:
3
bulges:
2
View larger
pre-miRNA
CTAAGTTTCGAT
AAAAACGAAACAAGCTATTCAA
ACCATCTATTTTTATAGCAAAGAGGGCTGACGTTAAATTTTCAGCTGCTGTGTCACACATATGTTG
GTTT
GTGGTTTGGTTTGTTTTTTTT
CGACTTCAG
dot-bracket secondary structure
.......((((.
(((((((((.(((((((..(((
((((..(((.......(((.((..((((((..........)))))).)).))).......))).))
))))
)))))))).)))))))))..)
)))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record