ABOUT THIS RECORD

ID: MNEST009847
species: Sebastes rastrelliger
miRNA family: mir-1827
source: miRNEST

Taxonomy by NCBI:
Sebastes rastrelliger Sebastes Sebastinae Sebastidae Scorpaenoidei Scorpaeniformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
CATGGATGCTGTCCTTGGGGCTGAGGTAGTAGATTGAATAGTTGTGGGGTTGTGTAACCTCTTTTTGAGATAACTATACAGTCTACTGTCTTTCCCAAGG
AGACAGCCAGGTC

dot-bracket secondary structure
.......(((((((((((((..((((((((((((((.((((((((((((((....))))))........)))))))).))))))))))))))))))))))
)..))))......


SIMILARITIES

miRBase tni-let-7e: 2e-42 PMRD no hits microPC no hits

UniProt no hits RFAM let-7: 9e-36

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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