ABOUT THIS RECORDspecies: Drosophila yakuba
miRNA family: miR-337
source: miRNEST
Taxonomy by NCBI:
Drosophila yakuba melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGCGTCATGCAGGAGATGAT miRNA* CGTCTTCGACACGGCGCCCAC mismatches: 3 bulges: 0 |
pre-miRNA
CGCGTGAGCAAGGGCGTCATGCAGGAGATGATTAACGCTCTACCCGGCATCGACGAGGCGATGAGCTATGCGGAGGTGATGAAGCTGGTCAACGGCATGA
ACTTCTCGGTAGTCGTCTTCGACACGGCGCCCACAGGACATA
dot-bracket secondary structure
.((....))..(((((((.((..(((((((((((..((((..((((.......)).))....))))....(((((((......((((.....))))....
))))).)).)))))))))))..)).)))))))..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CGCGTGAGCAAGGGCGTCATGCAGGAGATGATTAACGCTCTACCCGGCATCGACGAGGCGATGAGCTATGCGGAGGTGATGAAGCTGGTCAACGGCATGA
ACTTCTCGGTAGTCGTCTTCGACACGGCGCCCACAGGACATA
dot-bracket secondary structure
.((....))..(((((((.((..(((((((((((..((((..((((.......)).))....))))....(((((((......((((.....))))....
))))).)).)))))))))))..)).)))))))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|B4P1R6|ASNA_DROYA: 3e-19 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
