ABOUT THIS RECORDspecies: Solea senegalensis
miRNA family: miR-3113
source: miRNEST
Taxonomy by NCBI:
Solea senegalensis Solea Soleidae Soleoidei Pleuronectiformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTCCTGGTCCTGGTCCTGGTG miRNA* CCTGGATCAGTCCTGACAA mismatches: 3 bulges: 2 |
pre-miRNA
CTGTTGAGCGAACTGCTGCCCCGCCTGGATCAGTCCTGACAAATCTCCAGCAGCAGCAGGTGCAGGTCCTGGTCCTGGTCCTGGTGCTGCAGCTCCGCCT
CCTACT
dot-bracket secondary structure
..((.(((((....(((((..((((.(((((((.((.(((......((.((....)).)).....)))..))..))))))).))))..)))))..)).))
)..)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTGTTGAGCGAACTGCTGCCCCGCCTGGATCAGTCCTGACAAATCTCCAGCAGCAGCAGGTGCAGGTCCTGGTCCTGGTCCTGGTGCTGCAGCTCCGCCT
CCTACT
dot-bracket secondary structure
..((.(((((....(((((..((((.(((((((.((.(((......((.((....)).)).....)))..))..))))))).))))..)))))..)).))
)..)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
