miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Litopenaeus vannamei, Petrolisthes cinctipes, Penaeus monodon, Homarus americanus, Eriocheir sinensis, Carcinus maenas, Callinectes sapidus, Fenneropenaeus chinensis

ABOUT THIS RECORD

ID: MNEST009872
species: Callinectes sapidus
miRNA family: miR-705
source: miRNEST

Taxonomy by NCBI:
Callinectes sapidus Callinectes Portunidae Portunoidea Heterotremata Heterotremata/Thoracotremata group Eubrachyura Brachyura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GGTGGGGGGTGGGGGGGGCAT

miRNA*
GTCCCTCCCCCCTCCGACCGC

mismatches: 2
bulges: 2

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pre-miRNA
GCTGCCGCCGCCCGTCCCTCCCCCCTCCGACCGCCTCAGGTGCGGGTGGTGGGGGGTGGGGGGGGCATTCCTCTCCCG

dot-bracket secondary structure
((....)).....(((((((((((((((.(((((((.......))))))))))))).)))))))))............

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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