ABOUT THIS RECORDspecies: Peripatopsis sedgwicki
miRNA family: miR-1354
source: miRNEST
Taxonomy by NCBI:
Peripatopsis sedgwicki Peripatopsis Peripatopsidae Onychophora Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTGGTGATGATATGCTGAAA miRNA* TTGGCAAGATTATTATCCAGGGG mismatches: 3 bulges: 2 |
pre-miRNA
CCCCATATGCATTTGGAGCAAGGAAGTTTATGAAATATTTACTTGGTGATGATATGCTGAAAATATTAAACCATAAAGATTGGCAAGATTATTATCCAGG
GGAAAAATATGTCCAGAGGAACATTCTAGCACCAATTATT
dot-bracket secondary structure
............((((.((.((((.((((.((..((((((.((((((((((((.((((((...................))))))..))))))).)))))
....))))))...))...)))).)))).)).)))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCCCATATGCATTTGGAGCAAGGAAGTTTATGAAATATTTACTTGGTGATGATATGCTGAAAATATTAAACCATAAAGATTGGCAAGATTATTATCCAGG
GGAAAAATATGTCCAGAGGAACATTCTAGCACCAATTATT
dot-bracket secondary structure
............((((.((.((((.((((.((..((((((.((((((((((((.((((((...................))))))..))))))).)))))
....))))))...))...)))).)))).)).)))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
