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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000988
species: Hordeum vulgare
miRNA family: MIR2033
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGTTCTTTACAGAGGGAGTA

miRNA*
 CCCTCCGTGAAGAAATATA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 TAATGGCCAGTTGAGTTGGGTTCCCTCCGTGAAGAAATATAAGAGCGTTTAGATCACTAAAGTAGTGATGTAAATGCTCTTATAGTTCTTTACAGAGGGA
GTACCTACCAATTCCCACAGAC

dot-bracket secondary structure
...(((..(((((.((.((((((((((.((((((((.((((((((((((((.(((((((...))))))).)))))))))))))).)))))))).))))))
..))))))))))).))).....


SIMILARITIES
miRBase tae-MIR1121: 3e-20

PMRD tae-miR1121: 3e-20

microPC miR1121: 0.0000000001		UniProt no hits

RFAM MIR1122: 9e-24		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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