ABOUT THIS RECORDspecies: Aiptasia pallida
miRNA family: miR-1279
source: miRNEST
Taxonomy by NCBI:
Aiptasia pallida Aiptasia Aiptasiidae Actiniaria Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCTTGCTTCTTTATTTTC miRNA* AAATAACTAGCAAGGTCACG mismatches: 5 bulges: 1 |
pre-miRNA
TTTTTTTTTAGTCATCTTGCTTCTTTATTTTCAATAATGCCATGCTTTGATCGGACTATGAGCATTTCTACGACTGTTTCTATAAATAACTAGCAAGGTC
ACGTGGTCGGA
dot-bracket secondary structure
..........((.((((((((...((((((.....(((((((((.(((....))).)))).))))).................))))))..)))))))).
)).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTTTTTTTTAGTCATCTTGCTTCTTTATTTTCAATAATGCCATGCTTTGATCGGACTATGAGCATTTCTACGACTGTTTCTATAAATAACTAGCAAGGTC
ACGTGGTCGGA
dot-bracket secondary structure
..........((.((((((((...((((((.....(((((((((.(((....))).)))).))))).................))))))..)))))))).
)).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
