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Species belonging to selected taxon:

Salvelinus fontinalis



ABOUT THIS RECORD

ID: MNEST009902
species: Salvelinus fontinalis
miRNA family: miR-4297
source: miRNEST

Taxonomy by NCBI:
Salvelinus fontinalis Salvelinus Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTTCCTGTCTGTCATTGG

miRNA*
GCTGACCATTCGGAGGTGAT

mismatches: 4
bulges: 1

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pre-miRNA
AACTGTCTGTCTATGTTTGTTTGCCTTCCTGTCTGTCATTGGTCCAATCTCAGTCTCAGCCAATCATGTGCTGCTGACCATTCGGAGGTGATTAACCATA
TCTATCATAC


dot-bracket secondary structure
...........((((.(((.((((((((..((..((((.((((.((....................)).)))).)))).))..)))))))).))).))))
..........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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