ABOUT THIS RECORDspecies: Tribolium castaneum
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTGCTGCTGCTGCTGCTGCT miRNA* CTGCTGCGCCAGCGACCGGTAC mismatches: 5 bulges: 1 |
pre-miRNA
CTTCTCGCCCTGCTGCTGCTGCTGCTGCTGCTGCTGAGACGGGGGCTGCTGCTGCGCCAGCGACCGGTACAAGGGCGA
dot-bracket secondary structure
....(((((((((((.(((((.(((.((.((.(((........))).)).)).))).)))))..))))...)))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CTTCTCGCCCTGCTGCTGCTGCTGCTGCTGCTGCTGAGACGGGGGCTGCTGCTGCGCCAGCGACCGGTACAAGGGCGA
dot-bracket secondary structure
....(((((((((((.(((((.(((.((.((.(((........))).)).)).))).)))))..))))...)))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
