ABOUT THIS RECORDspecies: Tribolium castaneum
miRNA family: miR-2754
source: miRNEST
Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGGTATTGAGTGTAATAGT miRNA* TATTGCAAGTAACACTGACCT mismatches: 4 bulges: 0 |
pre-miRNA
CATGCTTGAAGCTATTGCAAGTAACACTGACCTGGACAAAGATTTGAAGGAGTTTCTGGGACGTTACACTGTTGATGTTGTTGGGTCTTGTGCTTTTGGT
ATTGAGTGTAATAGTTTCAAGCAC
dot-bracket secondary structure
..(((((((((((((((((..(((.(((((...((...(((((((((.(((...)))..(((((((......))))))).)))))))))...)).)))))
.)))..))))))))))))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CATGCTTGAAGCTATTGCAAGTAACACTGACCTGGACAAAGATTTGAAGGAGTTTCTGGGACGTTACACTGTTGATGTTGTTGGGTCTTGTGCTTTTGGT
ATTGAGTGTAATAGTTTCAAGCAC
dot-bracket secondary structure
..(((((((((((((((((..(((.(((((...((...(((((((((.(((...)))..(((((((......))))))).)))))))))...)).)))))
.)))..))))))))))))))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9VB31|C6A18_DROME: 0.0001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
