ABOUT THIS RECORDspecies: Tribolium castaneum
miRNA family: miR-4208
source: miRNEST
Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGATGTTATTTTAGAATTAGG miRNA* TAATTCTAAAATAACCTCAGG mismatches: 1 bulges: 0 |
pre-miRNA
CGTGCGATGTTTGTGACCACCCTAATTCTAAAATAACCTCAGGAGCTCTGTAATGACGAGTCGAGACTATAGTACTATGATGTTATTTTAGAATTAGGGT
GGTCACAACCGTGCGAT
dot-bracket secondary structure
((((((....(((((((((((((((((((((((((((.(((..((..(((((.(((....)))....)))))..)).))).)))))))))))))))))))
)))))))).))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGTGCGATGTTTGTGACCACCCTAATTCTAAAATAACCTCAGGAGCTCTGTAATGACGAGTCGAGACTATAGTACTATGATGTTATTTTAGAATTAGGGT
GGTCACAACCGTGCGAT
dot-bracket secondary structure
((((((....(((((((((((((((((((((((((((.(((..((..(((((.(((....)))....)))))..)).))).)))))))))))))))))))
)))))))).))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P49762|DOA_DROME: 0.0000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
