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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000993
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCCGTCTCAAAATA

miRNA*
 TTTTAGGACGGAGAAAGTATA

mismatches: 3
bulges: 0
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pre-miRNA
 TGACAGCAAGGTACTCCCTCCGTCTCAAAATAAGTGTCTCAACCTTAATATAACTTTGTATTAAAGCTGATAAAAAATTAAGACACTTATTTTAGGACGG
AGAAAGTATATGTGAACG

dot-bracket secondary structure
.....(((..(((((..((((((((.(((((((((((((...........(((.(((.(((((....))))).))).)))))))))))))))).))))))
))..))))).))).....


SIMILARITIES
miRBase osa-MIR812k: 0.0004

PMRD hpr-miR1120: 0.00000009

microPC miR1439: 0.0000000004		UniProt no hits

RFAM MIR1122: 1e-19		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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