miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Macaca fascicularis, Papio anubis, Homo sapiens, Pongo abelii, Macaca nemestrina, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST009946
species: Macaca mulatta
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTTGGTGCAAAAGTAATTGCA

miRNA*
 CAATTGCTTTTGCACCAACCT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TATATATTTAAGTTGGTGCAAAAGTAATTGCAAGTTTTGCCATTGGAAGGAATGGCAAAACCACAATTGCTTTTGCACCAACCTAATAATTT

dot-bracket secondary structure
.......(((.(((((((((((((((((((...(((((((((((......)))))))))))..))))))))))))))))))).)))......


SIMILARITIES
miRBase hsa-mir-548a-3: 5e-18

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-548: 4e-16		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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