ABOUT THIS RECORDspecies: Macaca mulatta
miRNA family: mir-548
source: miRNEST
Taxonomy by NCBI:
Macaca mulatta Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTGGTGCAAAAGTAATTGCA miRNA* CAATTGCTTTTGCACCAACCT mismatches: 2 bulges: 0 |
pre-miRNA
TATATATTTAAGTTGGTGCAAAAGTAATTGCAAGTTTTGCCATTGGAAGGAATGGCAAAACCACAATTGCTTTTGCACCAACCTAATAATTT
dot-bracket secondary structure
.......(((.(((((((((((((((((((...(((((((((((......)))))))))))..))))))))))))))))))).)))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TATATATTTAAGTTGGTGCAAAAGTAATTGCAAGTTTTGCCATTGGAAGGAATGGCAAAACCACAATTGCTTTTGCACCAACCTAATAATTT
dot-bracket secondary structure
.......(((.(((((((((((((((((((...(((((((((((......)))))))))))..))))))))))))))))))).)))......
SIMILARITIES| miRBase hsa-mir-548a-3: 5e-18 PMRD no hits microPC no hits | UniProt no hits RFAM mir-548: 4e-16 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
